Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_21070 | Not Available | Negative | 2395386 - 2395661 | 9891.62 |
| hypothetical protein | MSI_21080 | Not Available | Negative | 2395674 - 2396066 | 14493.3 |
| hypothetical protein | MSI_21090 | Not Available | Negative | 2396082 - 2397434 | 50506.6 |
| putative ncair mutase (pure) family protein | MSI_21100 | Not Available | Negative | 2397431 - 2398120 | 24071.0 |
| hypothetical protein | MSI_21110 | Not Available | Negative | 2398117 - 2398911 | 30027.7 |
| putative oxidoreductase of the aldo/keto reductase family | MSI_21120 | Not Available | Negative | 2398915 - 2400039 | 42406.9 |
| phosphotransferase system cellobiose-specific component iic | MSI_21130 | Not Available | Negative | 2400197 - 2402287 | 78043.0 |
| putative permease, dmt superfamily | MSI_21140 | Not Available | Positive | 2402334 - 2403227 | 32857.0 |
| putative transcriptional regulator | MSI_21150 | Not Available | Negative | 2403271 - 2403927 | 24954.9 |
| hypothetical protein | MSI_21160 | Not Available | Negative | 2403890 - 2404591 | 27030.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
