Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_20960 | Not Available | Negative | 2380266 - 2381510 | 48511.7 |
| hypothetical protein | MSI_20970 | Not Available | Negative | 2381745 - 2382788 | 40884.4 |
| gtp-binding protein ychf | MSI_20990 | Not Available | Negative | 2383733 - 2384863 | 41427.3 |
| diguanylate cyclase (ggdef) domain-containing protein | MSI_21000 | Not Available | Positive | 2384989 - 2386560 | 60685.9 |
| hypothetical protein | MSI_21010 | Not Available | Negative | 2386705 - 2387064 | 13513.0 |
| hypothetical protein | MSI_21020 | Not Available | Negative | 2387177 - 2387419 | 8374.02 |
| anaerobic ribonucleoside-triphosphate reductase | MSI_21030 | Not Available | Negative | 2387431 - 2389593 | 81597.8 |
| gtp-binding protein era | MSI_21040 | Not Available | Negative | 2389747 - 2390658 | 34193.1 |
| glycogen debranching enzyme glgx | MSI_21050 | Not Available | Positive | 2390719 - 2392821 | 78539.5 |
| glycogen/starch/alpha-glucan phosphorylase | MSI_21060 | Not Available | Positive | 2392869 - 2395322 | 93948.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
