Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon storage regulator (csra) | MSI_20240 | Not Available | Positive | 2297827 - 2298081 | 9103.1 |
| universal protein yeaz | MSI_20250 | Not Available | Negative | 2298124 - 2298801 | 24357.5 |
| atpase, yjee family | MSI_20260 | Not Available | Negative | 2298798 - 2299232 | 15689.9 |
| hypothetical protein | MSI_20270 | Not Available | Negative | 2299226 - 2299492 | 10139.6 |
| hypothetical protein | MSI_20280 | Not Available | Negative | 2299577 - 2300167 | 21864.7 |
| flagellar capping protein | MSI_20290 | Not Available | Negative | 2300225 - 2302183 | 72204.7 |
| putative flagellar protein flag | MSI_20300 | Not Available | Negative | 2302207 - 2302593 | 14140.0 |
| flagellin | MSI_20310 | Not Available | Negative | 2302746 - 2303594 | 30753.3 |
| flagellin | MSI_20320 | Not Available | Negative | 2304199 - 2305059 | 31249.2 |
| non-canonical purine ntp pyrophosphatase, rdgb/ham1 family | MSI_20330 | Not Available | Negative | 2305286 - 2305945 | 24335.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
