Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_20130 | Not Available | Negative | 2287242 - 2287469 | 8990.55 |
| tetratricopeptide repeat-containing protein | MSI_20140 | Not Available | Negative | 2287441 - 2287932 | 19123.0 |
| restriction endonuclease | MSI_20150 | Not Available | Positive | 2288338 - 2289699 | 52192.2 |
| putative icc phosphoesterase family protein | MSI_20160 | Not Available | Positive | 2289712 - 2290491 | 30107.4 |
| hypothetical protein | MSI_20170 | Not Available | Positive | 2290488 - 2291411 | 35999.1 |
| serine phosphatase rsbu, regulator of sigma subunit | MSI_20180 | Not Available | Positive | 2291529 - 2293202 | 61262.9 |
| anti-anti-sigma factor | MSI_20190 | Not Available | Positive | 2293216 - 2293554 | 12719.9 |
| atpase | MSI_20200 | Not Available | Positive | 2293594 - 2294142 | 21277.1 |
| flagellar hook-associated protein 3 | MSI_20220 | Not Available | Positive | 2296113 - 2297357 | 45548.2 |
| hypothetical protein | MSI_20230 | Not Available | Positive | 2297384 - 2297827 | 16607.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
