Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell wall-associated hydrolase (invasion-associated protein) | MSI_19520 | Not Available | Negative | 2228161 - 2228628 | 17475.6 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | MSI_19530 | Not Available | Positive | 2228770 - 2229825 | 38416.2 |
| glucose-1-phosphate thymidylyltransferase, short form | MSI_19540 | Not Available | Positive | 2229829 - 2230704 | 32140.8 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | MSI_19550 | Not Available | Positive | 2230714 - 2231304 | 22398.5 |
| dtdp-4-dehydrorhamnose reductase | MSI_19560 | Not Available | Negative | 2231506 - 2232456 | 35642.4 |
| hypothetical protein | MSI_19570 | Not Available | Negative | 2232482 - 2233201 | 28031.8 |
| aspartate/tyrosine/aromatic aminotransferase | MSI_19580 | Not Available | Positive | 2233259 - 2234449 | 43921.3 |
| glycogen/starch synthase, adp-glucose type | MSI_19590 | Not Available | Positive | 2234621 - 2236111 | 55306.5 |
| hypothetical protein | MSI_19600 | Not Available | Negative | 2236348 - 2237637 | 48324.9 |
| putative membrane-associated zn-dependent protease 1 | MSI_19610 | Not Available | Negative | 2238277 - 2239197 | 33098.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
