Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type sugar transport system, permease component | MSI_19300 | Not Available | Negative | 2204254 - 2205153 | 33283.0 |
| abc-type sugar transport system, permease component | MSI_19310 | Not Available | Negative | 2205173 - 2206057 | 33071.8 |
| transcriptional regulator | MSI_19320 | Not Available | Positive | 2206177 - 2207181 | 36874.8 |
| hypothetical protein | MSI_19330 | Not Available | Negative | 2207202 - 2207912 | 27168.1 |
| adenine specific dna methylase mod | MSI_19340 | Not Available | Positive | 2208102 - 2209319 | 46885.5 |
| hypothetical protein | MSI_19350 | Not Available | Negative | 2209508 - 2210836 | 48872.6 |
| dna-directed rna polymerase specialized sigma subunit | MSI_19360 | Not Available | Positive | 2211089 - 2212540 | 54716.6 |
| abc-type branched-chain amino acid transport system, periplasmic component | MSI_19370 | Not Available | Negative | 2212635 - 2213792 | 40526.4 |
| hypothetical protein | MSI_19380 | Not Available | Positive | 2213937 - 2214764 | 30737.5 |
| phosphoenolpyruvate carboxykinase (gtp) | MSI_19390 | Not Available | Negative | 2214856 - 2216700 | 67889.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
