Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_19200 | Not Available | Positive | 2188506 - 2190875 | 89272.8 |
| trna modification gtpase trme | MSI_19210 | Not Available | Positive | 2190889 - 2192418 | 54854.0 |
| putative efflux protein, mate family | MSI_19220 | Not Available | Positive | 2192440 - 2194308 | 68846.2 |
| putative metalloendopeptidase | MSI_19230 | Not Available | Negative | 2194489 - 2196513 | 77159.0 |
| hypothetical protein | MSI_19240 | Not Available | Positive | 2196641 - 2197534 | 33685.6 |
| imp cyclohydrolase-like protein | MSI_19250 | Not Available | Positive | 2197600 - 2198337 | 26752.4 |
| aicar transformylase/imp cyclohydrolase purh | MSI_19260 | Not Available | Positive | 2198362 - 2199549 | 43624.0 |
| hypothetical protein | MSI_19270 | Not Available | Negative | 2199619 - 2200221 | 21461.3 |
| alpha-galactosidase | MSI_19280 | Not Available | Negative | 2200325 - 2202643 | 87543.3 |
| abc-type sugar transport system, periplasmic component | MSI_19290 | Not Available | Negative | 2202812 - 2204140 | 48963.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
