Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructose-2,6-bisphosphatase | MSI_19080 | Not Available | Positive | 2177190 - 2177783 | 22715.0 |
| diguanylate cyclase (ggdef) domain-containing protein | MSI_19090 | Not Available | Negative | 2177819 - 2179735 | 72551.8 |
| hypothetical protein | MSI_19100 | Not Available | Negative | 2179779 - 2181116 | 51066.9 |
| putative sam-dependent methyltransferases/trna (uracil-5-)-methyltransferase family protein | MSI_19110 | Not Available | Negative | 2181113 - 2182336 | 44957.1 |
| hypothetical protein | MSI_19120 | Not Available | Positive | 2182364 - 2182774 | 15406.5 |
| hypothetical protein | MSI_19130 | Not Available | Positive | 2182771 - 2183307 | 19883.0 |
| poly(a) polymerase | MSI_19140 | Not Available | Positive | 2183489 - 2184658 | 44419.2 |
| abc-type dipeptide/oligopeptide/nickel transport system, atpase component | MSI_19150 | Not Available | Negative | 2184685 - 2185635 | 35670.1 |
| pseudouridylate synthase, 23s rna-specific | MSI_19160 | Not Available | Negative | 2185675 - 2186637 | 36239.2 |
| hypothetical protein | MSI_19170 | Not Available | Positive | 2186711 - 2187232 | 19357.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
