Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-xylosidase | MSI_18980 | Not Available | Positive | 2166077 - 2167021 | 36725.1 |
| alpha-l-arabinofuranosidase | MSI_18990 | Not Available | Positive | 2167039 - 2168589 | 57758.3 |
| alpha-l-arabinofuranosidase | MSI_19000 | Not Available | Positive | 2168632 - 2170122 | 56200.6 |
| udp-n-acetylmuramate--alanine ligase | MSI_19010 | Not Available | Positive | 2170163 - 2171668 | 55379.8 |
| hypothetical protein | MSI_19020 | Not Available | Positive | 2171760 - 2172626 | 32223.8 |
| hypothetical protein | MSI_19030 | Not Available | Positive | 2172851 - 2173186 | 12522.0 |
| rna polymerase sigma factor, sigma-70 family | MSI_19040 | Not Available | Positive | 2173176 - 2173751 | 21957.5 |
| hypothetical protein | MSI_19050 | Not Available | Positive | 2173748 - 2174209 | 17337.3 |
| cytidylate kinase | MSI_19060 | Not Available | Positive | 2174279 - 2174830 | 21080.2 |
| methyl-accepting chemotaxis protein | MSI_19070 | Not Available | Negative | 2174862 - 2177057 | 80466.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
