Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_18070 | Not Available | Positive | 2060658 - 2060897 | 8660.16 |
| hypothetical protein | MSI_18080 | Not Available | Negative | 2061018 - 2063621 | 95926.6 |
| hypothetical protein | MSI_18090 | Not Available | Negative | 2063644 - 2064558 | 34155.2 |
| phenylalanyl-trna synthetase, alpha subunit | MSI_18100 | Not Available | Negative | 2064808 - 2066364 | 57704.5 |
| hypothetical protein | MSI_18110 | Not Available | Negative | 2066463 - 2066945 | 18521.9 |
| hypothetical protein | MSI_18120 | Not Available | Negative | 2066997 - 2067692 | 27104.8 |
| putative membrane protein | MSI_18130 | Not Available | Negative | 2067689 - 2068342 | 25477.8 |
| diguanylate cyclase (ggdef) domain-containing protein | MSI_18140 | Not Available | Negative | 2068350 - 2069480 | 42800.1 |
| hypothetical protein | MSI_18150 | Not Available | Negative | 2069464 - 2071062 | 61763.7 |
| putative tim-barrel protein, nifr3 family | MSI_18160 | Not Available | Negative | 2071137 - 2072183 | 38569.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
