Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_17970 | Not Available | Negative | 2053091 - 2053423 | 12334.0 |
| hypothetical protein | MSI_17980 | Not Available | Negative | 2053551 - 2053685 | 5135.91 |
| acetyltransferase | MSI_17990 | Not Available | Negative | 2053686 - 2054210 | 19874.9 |
| sortase | MSI_18000 | Not Available | Negative | 2054265 - 2054813 | 20900.1 |
| sugar kinase, ribokinase family | MSI_18010 | Not Available | Negative | 2054816 - 2055721 | 32889.9 |
| transglutaminase-like enzyme, putative cysteine protease | MSI_18020 | Not Available | Negative | 2055755 - 2056642 | 34437.2 |
| transglutaminase-like enzyme, putative cysteine protease | MSI_18030 | Not Available | Negative | 2056686 - 2057261 | 21605.4 |
| hypothetical protein | MSI_18040 | Not Available | Negative | 2057276 - 2058331 | 40130.5 |
| putative transcriptional regulator | MSI_18050 | Not Available | Negative | 2058538 - 2059329 | 30638.1 |
| putative aminoglycoside phosphotransferase | MSI_18060 | Not Available | Positive | 2059504 - 2060337 | 31823.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
