Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_16530 | Not Available | Negative | 1907933 - 1908409 | 17478.1 |
| adenylate cyclase, family 3 | MSI_16540 | Not Available | Positive | 1908463 - 1911258 | 105260.0 |
| site-specific recombinase xerd | MSI_16550 | Not Available | Positive | 1911303 - 1912208 | 33976.0 |
| atp-dependent protease hslvu, peptidase subunit | MSI_16560 | Not Available | Positive | 1912260 - 1912805 | 19698.9 |
| atp-dependent protease hslvu, atpase subunit | MSI_16570 | Not Available | Positive | 1912814 - 1914184 | 51188.6 |
| flagellar basal-body rod protein flgb | MSI_16580 | Not Available | Positive | 1914322 - 1914738 | 16260.0 |
| flagellar basal-body rod protein flgc | MSI_16590 | Not Available | Positive | 1914774 - 1915232 | 16330.2 |
| flagellar hook-basal body complex protein flie | MSI_16600 | Not Available | Positive | 1915263 - 1915658 | 14327.0 |
| flagellar basal-body m-ring protein/flagellar hook-basal body protein (flif) | MSI_16610 | Not Available | Positive | 1915882 - 1917591 | 64449.8 |
| flagellar motor switch protein flig | MSI_16620 | Not Available | Positive | 1917604 - 1918698 | 41047.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
