Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pullulanase pula | MSI_16330 | Not Available | Positive | 1881992 - 1883863 | 70122.8 |
| hypothetical protein | MSI_16340 | Not Available | Negative | 1883850 - 1884248 | 15196.4 |
| sodium pump decarboxylase, gamma subunit | MSI_16350 | Not Available | Positive | 1884665 - 1884913 | 8400.6 |
| oxaloacetate decarboxylase alpha subunit | MSI_16360 | Not Available | Positive | 1884933 - 1887032 | 73460.2 |
| sodium ion-translocating decarboxylase, beta subunit | MSI_16370 | Not Available | Positive | 1887127 - 1888563 | 50333.5 |
| response regulator | MSI_16380 | Not Available | Positive | 1888662 - 1890938 | 84868.5 |
| signal transduction histidine kinase | MSI_16390 | Not Available | Positive | 1890975 - 1894994 | 149253.0 |
| hd-gyp domain-containing protein | MSI_16400 | Not Available | Positive | 1894995 - 1897268 | 86151.9 |
| hypothetical protein | MSI_16410 | Not Available | Negative | 1897356 - 1898183 | 31444.5 |
| ygit-type zinc finger domain-containing protein | MSI_16420 | Not Available | Negative | 1898185 - 1898421 | 8717.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
