Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_15110 | Not Available | Positive | 1741938 - 1743266 | 48327.1 |
| glycosylphosphatidylinositol transamidase (gpit), subunit gpi8 | MSI_15120 | Not Available | Negative | 1743258 - 1745483 | 81795.1 |
| abc-type transport system, periplasmic component/surface lipoprotein | MSI_15130 | Not Available | Negative | 1745470 - 1745817 | 13101.4 |
| hypothetical protein | MSI_15140 | Not Available | Negative | 1745859 - 1746608 | 27322.7 |
| hypothetical protein | MSI_15150 | Not Available | Negative | 1746633 - 1748264 | 60381.7 |
| flagellar basal-body rod protein flgf | MSI_15160 | Not Available | Positive | 1748835 - 1749638 | 30056.9 |
| flagellar basal-body rod protein flgg, gram-negative bacteria/flagellar basal-body rod protein flgf | MSI_15170 | Not Available | Positive | 1749651 - 1750445 | 28585.8 |
| rod binding protein | MSI_15180 | Not Available | Positive | 1750626 - 1751135 | 18384.4 |
| alpha-l-arabinofuranosidase | MSI_15190 | Not Available | Negative | 1751223 - 1751909 | 25147.8 |
| ybak/ebsc protein | MSI_15210 | Not Available | Positive | 1753802 - 1754284 | 17727.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
