Treponema sp. JC4

Gram-negativeSpirilla

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Treponemataceae

Genus

Treponema

Description

Treponema sp. JC4 is a Gram-negative bacterium characterized by its spirilla shape. This species possesses flagella, which are essential for its motility. Treponema sp. JC4 has a single replicon, indicating a streamlined genomic organization. The genomic data for this organism is available under the accession number AJGU00000000.1. The presence of flagella is notable as it suggests that Treponema sp. JC4 is likely capable of active movement in its environment, which may play a role in its ecological interactions. Being a member of the Treponema genus, it is reasonable to consider its potential involvement in specific ecological niches, possibly in anaerobic environments where many Treponema species thrive. Understanding the motility and genomic structure of Treponema sp. JC4 could provide insights into its ecological roles, particularly in anaerobic habitats. The flagella enable the organism to navigate these environments effectively, which may influence its interactions with other microorganisms and its ability to utilize available resources. Overall, the traits of Treponema sp. JC4 highlight its potential adaptability and ecological significance within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilyTreponemataceae
GenusTreponema
SpeciesTreponema sp. JC4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Treponema sp. JC4
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Treponema sp. JC4


Gene Summary

Adenine Count

891278 bp

Thymine Count

917610 bp

Guanine Count

615445 bp

Cytosine Count

607707 bp

Genome Length

3032045 bp

Protein-coding Genes

2570 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
molybdenum cofactor synthesis domain-containing proteinMSI_13080Not AvailableNegative1526470 - 152766642450.5
formate dehydrogenase, alpha subunitMSI_13090Not AvailableNegative1527666 - 153036599383.8
nadph-dependent glutamate synthaseMSI_13100Not AvailableNegative1530362 - 153219467040.3
ribosomal protein s21MSI_13110Not AvailablePositive1532397 - 15326038313.2
type iv leader peptidase family proteinMSI_13120Not AvailablePositive1532672 - 153311516701.4
methyl-accepting chemotaxis proteinMSI_13130Not AvailablePositive1533170 - 153525475195.3
abc-type sugar transport system, periplasmic componentMSI_13140Not AvailablePositive1535268 - 153634738736.2
anti-sigma regulatory factor (ser/thr protein kinase)MSI_13150Not AvailableNegative1536368 - 153677214646.4
stage ii sporulation protein e (spoiie)MSI_13160Not AvailableNegative1536776 - 153840161010.7
dihydroorotate dehydrogenase (subfamily 1) family proteinMSI_13170Not AvailableNegative1538426 - 153993754445.5

Displaying genes 1291 – 1300 of 2613 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.