Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactokinase | MSI_12040 | Not Available | Negative | 1405939 - 1407279 | 48779.7 |
| (e)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase | MSI_12050 | Not Available | Negative | 1407318 - 1408160 | 30536.6 |
| hypothetical protein | MSI_12060 | Not Available | Negative | 1408231 - 1409445 | 44148.6 |
| hypothetical protein | MSI_12070 | Not Available | Negative | 1409442 - 1411190 | 63700.0 |
| preprotein translocase, yajc subunit | MSI_12080 | Not Available | Negative | 1411195 - 1411632 | 15830.6 |
| hypothetical protein | MSI_12110 | Not Available | Negative | 1414792 - 1415208 | 15996.0 |
| abc-type xylose transport system, periplasmic component | MSI_12120 | Not Available | Positive | 1415550 - 1416635 | 39586.5 |
| transcriptional regulator of sugar metabolism | MSI_12130 | Not Available | Positive | 1416690 - 1417445 | 27983.1 |
| 1-phosphofructokinase | MSI_12140 | Not Available | Positive | 1417445 - 1418359 | 32778.4 |
| pts system, fructose-specific | MSI_12150 | Not Available | Positive | 1418423 - 1420300 | 64620.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
