Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein l35 | MSI_11940 | Not Available | Positive | 1398096 - 1398296 | 7638.64 |
| ribosomal protein l20 | MSI_11950 | Not Available | Positive | 1398309 - 1398668 | 13329.3 |
| hypothetical protein | MSI_11960 | Not Available | Positive | 1398687 - 1399280 | 21624.1 |
| cell division protein zapa | MSI_11970 | Not Available | Positive | 1399280 - 1399591 | 11584.0 |
| hypothetical protein | MSI_11980 | Not Available | Positive | 1399593 - 1400051 | 17328.8 |
| response regulator | MSI_11990 | Not Available | Negative | 1400053 - 1401303 | 46960.6 |
| nol1/nop2/sun family protein | MSI_12000 | Not Available | Negative | 1401370 - 1402227 | 31882.0 |
| beta-glucosidase | MSI_12010 | Not Available | Negative | 1402231 - 1403433 | 44797.8 |
| short-chain dehydrogenase | MSI_12020 | Not Available | Positive | 1403480 - 1404268 | 28555.9 |
| putative nicotinate phosphoribosyltransferase | MSI_12030 | Not Available | Positive | 1404403 - 1405869 | 54935.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
