Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylosuccinate synthase | MSI_11010 | Not Available | Negative | 1284448 - 1285674 | 45445.0 |
| hypothetical protein | MSI_11020 | Not Available | Positive | 1285945 - 1286460 | 19457.7 |
| iron-only hydrogenase maturation rsam protein hyde | MSI_11030 | Not Available | Negative | 1286462 - 1287517 | 39638.8 |
| hydrogenase maturation gtpase hydf | MSI_11040 | Not Available | Negative | 1287520 - 1288470 | 35024.7 |
| small gtp-binding protein | MSI_11050 | Not Available | Negative | 1288430 - 1288750 | 11430.5 |
| iron-only hydrogenase maturation rsam protein hydg | MSI_11060 | Not Available | Negative | 1288794 - 1290314 | 57936.1 |
| outer membrane protein | MSI_11070 | Not Available | Positive | 1290392 - 1291744 | 49637.0 |
| hypothetical protein | MSI_11080 | Not Available | Positive | 1291748 - 1293088 | 49198.9 |
| hypothetical protein | MSI_11090 | Not Available | Positive | 1293099 - 1296365 | 112620.0 |
| hypothetical protein (putative transposase or invertase) | MSI_11100 | Not Available | Negative | 1296604 - 1297422 | 31732.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
