Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_10090 | Not Available | Positive | 1171408 - 1171827 | 15640.9 |
| hypothetical protein | MSI_10100 | Not Available | Positive | 1171824 - 1173335 | 54371.4 |
| hypothetical protein | MSI_10110 | Not Available | Positive | 1173347 - 1174039 | 24454.8 |
| seryl-trna synthetase | MSI_10120 | Not Available | Positive | 1174072 - 1175352 | 47962.2 |
| putative permease | MSI_10130 | Not Available | Positive | 1175395 - 1176468 | 40604.2 |
| hypothetical protein | MSI_10140 | Not Available | Negative | 1176478 - 1177416 | 35804.2 |
| hypothetical protein | MSI_10150 | Not Available | Negative | 1177409 - 1178116 | 27014.0 |
| Trna-val | Not Available | Not Available | Positive | 1178282 - 1178355 | Not Available |
| diguanylate cyclase (ggdef) domain-containing protein | MSI_10170 | Not Available | Positive | 1178440 - 1180152 | 65496.1 |
| trna pseudouridine 55 synthase | MSI_10180 | Not Available | Negative | 1180149 - 1181198 | 38419.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
