Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_9380 | Not Available | Positive | 1094419 - 1095963 | 57363.7 |
| riboflavin synthase, alpha subunit | MSI_9390 | Not Available | Positive | 1096111 - 1096746 | 22490.1 |
| gtp cyclohydrolase ii/3,4-dihydroxy-2-butanone 4-phosphate synthase | MSI_9400 | Not Available | Positive | 1096756 - 1097988 | 45361.9 |
| 6,7-dimethyl-8-ribityllumazine synthase | MSI_9410 | Not Available | Positive | 1097995 - 1098468 | 16354.9 |
| hypothetical protein | MSI_9420 | Not Available | Negative | 1098481 - 1098759 | 10747.2 |
| hypothetical protein | MSI_9430 | Not Available | Negative | 1098743 - 1099021 | 10456.2 |
| transcriptional regulator | MSI_9440 | Not Available | Positive | 1099129 - 1100655 | 57661.2 |
| rubrerythrin | MSI_9450 | Not Available | Positive | 1100757 - 1101317 | 21159.7 |
| metalloendopeptidase-like membrane protein | MSI_9460 | Not Available | Negative | 1101536 - 1102546 | 36696.9 |
| 23s rrna methylase | MSI_9470 | Not Available | Negative | 1102574 - 1103176 | 22377.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
