Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc-type transport system, permease component | MSI_9280 | Not Available | Negative | 1079328 - 1080254 | 32935.2 |
| abc-type transport system, permease component | MSI_9290 | Not Available | Negative | 1080265 - 1081392 | 40702.1 |
| abc-type transport system, atpase component | MSI_9300 | Not Available | Negative | 1081394 - 1082941 | 57590.9 |
| putative abc-type transport system, periplasmic component/surface lipoprotein | MSI_9310 | Not Available | Negative | 1083179 - 1084294 | 39520.9 |
| riboflavin biosynthesis protein ribd | MSI_9320 | Not Available | Positive | 1084517 - 1085635 | 40377.1 |
| lipase (class 3) | MSI_9330 | Not Available | Negative | 1085640 - 1087214 | 58713.9 |
| periplasmic protease | MSI_9340 | Not Available | Positive | 1087402 - 1089270 | 68875.6 |
| peptidase family s41 | MSI_9350 | Not Available | Positive | 1089349 - 1091250 | 70624.5 |
| hypothetical protein | MSI_9360 | Not Available | Positive | 1091313 - 1092440 | 44243.5 |
| peptidase family s41 | MSI_9370 | Not Available | Positive | 1092468 - 1094384 | 72750.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
