Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase (ggdef) domain-containing protein | MSI_9180 | Not Available | Negative | 1064394 - 1065824 | 54718.3 |
| 3-oxoacyl-(acyl-carrier-protein) synthase | MSI_9190 | Not Available | Positive | 1065979 - 1067247 | 45778.3 |
| hypothetical protein | MSI_9200 | Not Available | Positive | 1067558 - 1067971 | 15742.1 |
| transcriptional regulator | MSI_9210 | Not Available | Positive | 1068248 - 1069255 | 37568.3 |
| abc-type sugar transport system, periplasmic component | MSI_9220 | Not Available | Positive | 1069326 - 1070615 | 47223.9 |
| abc-type sugar transport system, permease component | MSI_9230 | Not Available | Positive | 1070894 - 1071958 | 39425.3 |
| abc-type sugar transport system, permease component | MSI_9240 | Not Available | Positive | 1071955 - 1072878 | 33186.5 |
| glycosidase | MSI_9250 | Not Available | Positive | 1072903 - 1074711 | 70225.0 |
| beta-phosphoglucomutase | MSI_9260 | Not Available | Positive | 1074893 - 1077889 | 110569.0 |
| sugar kinase, ribokinase family | MSI_9270 | Not Available | Positive | 1078078 - 1079046 | 34322.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
