Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fucose isomerase | MSI_09070 | Not Available | Positive | 1051257 - 1052762 | 55715.2 |
| arac-type dna-binding domain-containing protein | MSI_09080 | Not Available | Negative | 1052996 - 1053739 | 28982.7 |
| endoglucanase | MSI_09090 | Not Available | Negative | 1053743 - 1054945 | 44618.5 |
| beta-glucanase | MSI_09100 | Not Available | Negative | 1055028 - 1057280 | 83805.4 |
| hypothetical protein | MSI_09110 | Not Available | Negative | 1057380 - 1058441 | 37937.2 |
| endoglucanase | MSI_09120 | Not Available | Positive | 1058676 - 1059713 | 39456.8 |
| atp-binding cassette protein, chvd family | MSI_09130 | Not Available | Positive | 1059965 - 1061701 | 64334.6 |
| putative transcriptional regulator | MSI_9150 | Not Available | Positive | 1061978 - 1062640 | 24846.5 |
| hypothetical protein | MSI_9160 | Not Available | Positive | 1062643 - 1063251 | 23653.9 |
| putative dehydrogenase | MSI_9170 | Not Available | Positive | 1063375 - 1064127 | 26370.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
