Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_00800 | Not Available | - | 82081 - 82458 | 14226.8 |
| guanosine polyphosphate pyrophosphohydrolase/synthetase | MSI_00810 | Not Available | - | 82497 - 83909 | 54080.6 |
| outer membrane protein | MSI_00820 | Not Available | + | 84054 - 85349 | 47479.9 |
| rnd family efflux transporter, mfp subunit | MSI_00830 | Not Available | + | 85370 - 86407 | 36539.9 |
| cation/multidrug efflux pump | MSI_00840 | Not Available | + | 86404 - 89520 | 113012.0 |
| hypothetical protein | MSI_00850 | Not Available | + | 89523 - 89828 | 11655.9 |
| protein-(glutamine-n5) methyltransferase, release factor-specific | MSI_00860 | Not Available | - | 89834 - 90784 | 35579.8 |
| peptide chain release factor 1 | MSI_00870 | Not Available | - | 90925 - 92007 | 40810.7 |
| hypothetical protein | MSI_00880 | Not Available | + | 92369 - 92980 | 21006.3 |
| hypothetical protein | MSI_00890 | Not Available | + | 93190 - 94743 | 58145.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
