Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazoleglycerol-phosphate dehydratase | MSI_08770 | Not Available | Positive | 1018481 - 1019092 | 22069.3 |
| lysophospholipase l1 | MSI_08780 | Not Available | Positive | 1019293 - 1019985 | 26237.4 |
| ribonuclease hi | MSI_08790 | Not Available | Positive | 1019995 - 1020444 | 16259.4 |
| hypothetical protein | MSI_08800 | Not Available | Positive | 1020526 - 1021404 | 33446.0 |
| hypothetical protein | MSI_08810 | Not Available | Positive | 1021415 - 1022620 | 44675.8 |
| hypothetical protein | MSI_08820 | Not Available | Positive | 1022620 - 1023351 | 26849.3 |
| 2-isopropylmalate synthase | MSI_08830 | Not Available | Positive | 1023767 - 1025440 | 61898.5 |
| putative ap superfamily protein | MSI_08840 | Not Available | Positive | 1025485 - 1026615 | 42500.0 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | MSI_08850 | Not Available | Negative | 1026703 - 1028274 | 57118.1 |
| Trna-leu | Not Available | Not Available | Positive | 1028423 - 1028508 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
