Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_08470 | Not Available | Positive | 982787 - 983947 | 41934.9 |
| abc-type sugar transport system, periplasmic component | MSI_08480 | Not Available | Positive | 984331 - 985320 | 35983.4 |
| abc-type sugar transport system, atpase component | MSI_08490 | Not Available | Positive | 985426 - 986946 | 55776.9 |
| ribose/xylose/arabinose/galactoside abc-type transport system, permease component | MSI_08500 | Not Available | Positive | 986939 - 988012 | 37591.2 |
| ribose/xylose/arabinose/galactoside abc-type transport system, permease component | MSI_08510 | Not Available | Positive | 988024 - 989085 | 38552.8 |
| abc-type sugar transport system, periplasmic component | MSI_08520 | Not Available | Positive | 989201 - 990214 | 37106.4 |
| histidine kinase/dna gyrase b/hsp90-like atpase | MSI_08530 | Not Available | Positive | 990215 - 991687 | 56770.5 |
| response regulator | MSI_08540 | Not Available | Positive | 991707 - 993290 | 60084.6 |
| citrate synthase | MSI_08550 | Not Available | Positive | 993503 - 994864 | 50855.7 |
| pseudouridine synthase | MSI_08560 | Not Available | Positive | 995073 - 995909 | 31782.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
