Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| histidinol dehydrogenase | MSI_00700 | Not Available | - | 71878 - 73248 | 48818.2 |
| phosphoribosyl-atp pyrophosphohydrolase | MSI_00710 | Not Available | - | 73269 - 74561 | 47507.8 |
| putative efflux protein, mate family | MSI_00720 | Not Available | + | 74661 - 76040 | 49936.3 |
| protein-tyrosine-phosphatase | MSI_00730 | Not Available | + | 76146 - 76610 | 17499.7 |
| homoserine trans-succinylase | MSI_00740 | Not Available | - | 76852 - 77256 | 15646.4 |
| hypothetical protein | MSI_00750 | Not Available | - | 77210 - 77761 | 21253.9 |
| esterase | MSI_00760 | Not Available | + | 77829 - 78842 | 37336.5 |
| collagenase | MSI_00770 | Not Available | + | 78865 - 80385 | 56944.6 |
| hypothetical protein | MSI_00780 | Not Available | + | 80389 - 81123 | 27639.9 |
| dna repair exonuclease | MSI_00790 | Not Available | + | 81123 - 82004 | 33408.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
