Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose-phosphate pyrophosphokinase | MSI_07750 | Not Available | Positive | 912008 - 913309 | 48656.7 |
| sugar (pentulose and hexulose) kinase | MSI_07760 | Not Available | Positive | 913324 - 914592 | 45139.0 |
| putative hydrolase (had superfamily) | MSI_07770 | Not Available | Positive | 914579 - 915214 | 23643.8 |
| diguanylate cyclase (ggdef) domain-containing protein | MSI_07780 | Not Available | Positive | 915302 - 916477 | 44487.4 |
| hd-gyp domain-containing protein | MSI_07790 | Not Available | Positive | 916480 - 917427 | 36865.6 |
| abc-type sugar transport system, periplasmic component | MSI_07800 | Not Available | Positive | 917405 - 918646 | 45620.9 |
| radical sam protein, tigr01212 family | MSI_07810 | Not Available | Positive | 918667 - 919590 | 34138.1 |
| phosphoenolpyruvate-protein phosphotransferase | MSI_07820 | Not Available | Positive | 919639 - 921372 | 63853.2 |
| beta-1,4-xylanase | MSI_07830 | Not Available | Positive | 921394 - 922419 | 39175.9 |
| protein of unknown function (duf2442) | MSI_07840 | Not Available | Positive | 922472 - 922774 | 11060.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
