Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteinyl-trna synthetase | MSI_07550 | Not Available | Positive | 890974 - 892524 | 57570.3 |
| rna polymerase sigma factor, sigma-70 family | MSI_07560 | Not Available | Positive | 892734 - 893300 | 21872.3 |
| hypothetical protein | MSI_07570 | Not Available | Positive | 893281 - 894009 | 25654.5 |
| transglutaminase-like enzyme, putative cysteine protease | MSI_07580 | Not Available | Positive | 894009 - 895718 | 63534.3 |
| uridylate kinase, putative | MSI_07590 | Not Available | Positive | 895811 - 896509 | 25495.4 |
| muramidase (flagellum-specific) | MSI_07600 | Not Available | Negative | 896699 - 897169 | 17782.0 |
| dna repair protein radc | MSI_07610 | Not Available | Positive | 897356 - 898021 | 24382.8 |
| pega domain-containing protein | MSI_07620 | Not Available | Positive | 898039 - 898377 | 13179.0 |
| trypsin-like serine protease | MSI_07630 | Not Available | Positive | 898604 - 899863 | 44429.7 |
| excinuclease abc, b subunit | MSI_07640 | Not Available | Positive | 899962 - 901959 | 76637.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
