Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase, beta subunit | MSI_07150 | Not Available | Positive | 859314 - 862856 | 132785.0 |
| dna-directed rna polymerase, beta subunit, predominant form | MSI_07160 | Not Available | Positive | 862849 - 867162 | 160390.0 |
| hypothetical protein | MSI_07170 | Not Available | Negative | 867257 - 868165 | 35561.4 |
| ribosomal protein s12, bacterial/organelle | MSI_07180 | Not Available | Positive | 868646 - 869020 | 13694.0 |
| ribosomal protein s7, bacterial/organelle | MSI_07190 | Not Available | Positive | 869033 - 869503 | 17929.0 |
| translation elongation factor tu | MSI_07200 | Not Available | Positive | 870122 - 871309 | 43466.1 |
| ribosomal protein s10, bacterial/organelle | MSI_07210 | Not Available | Positive | 871377 - 871685 | 11463.2 |
| 50s ribosomal protein l3, bacterial | MSI_07220 | Not Available | Positive | 871813 - 872433 | 22520.5 |
| 50s ribosomal protein l4, bacterial/organelle | MSI_07230 | Not Available | Positive | 872446 - 873084 | 23622.3 |
| ribosomal protein l23 | MSI_07240 | Not Available | Positive | 873084 - 873368 | 10343.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
