Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_06650 | Not Available | Negative | 800433 - 803435 | 112482.0 |
| hypothetical protein | MSI_06660 | Not Available | Negative | 803469 - 804098 | 23341.0 |
| cell wall-associated hydrolase (invasion-associated protein) | MSI_06670 | Not Available | Negative | 804106 - 805224 | 40759.8 |
| 1,4-alpha-glucan branching enzyme | MSI_06680 | Not Available | Negative | 805333 - 805653 | 11930.9 |
| s-adenosylmethionine synthetase | MSI_06690 | Not Available | Positive | 805883 - 807082 | 43503.8 |
| serine phosphatase rsbu, regulator of sigma subunit | MSI_06700 | Not Available | Negative | 807156 - 809183 | 75562.7 |
| permease of the drug/metabolite transporter (dmt) superfamily | MSI_06710 | Not Available | Negative | 809209 - 811077 | 68959.1 |
| hypothetical protein | MSI_06720 | Not Available | Negative | 811082 - 811993 | 35914.5 |
| endonuclease iii | MSI_06730 | Not Available | Positive | 812178 - 812822 | 23855.0 |
| small-conductance mechanosensitive channel | MSI_06740 | Not Available | Positive | 812932 - 813777 | 31447.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
