Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_05330 | Not Available | Negative | 654592 - 654789 | 7160.74 |
| amidase | MSI_05340 | Not Available | Positive | 654999 - 655601 | 22391.7 |
| putative hydrolase of the had superfamily | MSI_05350 | Not Available | Negative | 655606 - 655791 | 6567.69 |
| cobalamin-5-phosphate synthase | MSI_05360 | Not Available | Negative | 655743 - 656558 | 30133.5 |
| adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase | MSI_05370 | Not Available | Negative | 656555 - 657127 | 21198.8 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | MSI_05380 | Not Available | Negative | 657124 - 658158 | 36270.0 |
| cobyric acid synthase cobq | MSI_05390 | Not Available | Negative | 658145 - 659725 | 57149.1 |
| abc-type cobalamin/fe3+siderophore transport system, atpase component | MSI_05400 | Not Available | Negative | 659685 - 660455 | 28141.5 |
| adenylate cyclase, family 3 | MSI_05410 | Not Available | Negative | 660442 - 661653 | 45984.7 |
| hypothetical protein | MSI_05420 | Not Available | Negative | 661646 - 662839 | 45925.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
