Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalamin biosynthesis protein cbid | MSI_05130 | Not Available | Negative | 633509 - 634654 | 40874.7 |
| precorrin isomerase | MSI_05140 | Not Available | Negative | 634654 - 635292 | 22882.8 |
| histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase | MSI_05150 | Not Available | Negative | 635289 - 636335 | 38993.6 |
| prevent-host-death family protein | MSI_05160 | Not Available | Positive | 636529 - 636813 | 10936.2 |
| plasmid stabilization system protein | MSI_05170 | Not Available | Positive | 636803 - 637150 | 13714.4 |
| cobalamin biosynthesis protein cobd | MSI_05180 | Not Available | Negative | 637077 - 637772 | 25817.5 |
| phosphopyruvate hydratase | MSI_05190 | Not Available | Positive | 638223 - 639530 | 46751.8 |
| hypothetical protein | MSI_05200 | Not Available | Positive | 639735 - 640307 | 21949.7 |
| flavodoxin, short chain | MSI_05210 | Not Available | Positive | 640316 - 640735 | 14549.0 |
| putative exporter of the rnd superfamily | MSI_05220 | Not Available | Negative | 640806 - 643157 | 87226.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
