Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr00370 family protein | MSI_05030 | Not Available | Negative | 623332 - 625023 | 60671.3 |
| abc-type branched-chain amino acid transport system, atpase component | MSI_05040 | Not Available | Negative | 625049 - 625789 | 27481.7 |
| abc-type branched-chain amino acid transport system, atpase component | MSI_05050 | Not Available | Negative | 625799 - 626611 | 30368.7 |
| abc-type branched-chain amino acid transport system, permease component | MSI_05060 | Not Available | Negative | 626608 - 627675 | 38053.0 |
| branched-chain amino acid abc-type transport system, permease component | MSI_05070 | Not Available | Negative | 627688 - 628599 | 32744.5 |
| abc-type branched-chain amino acid transport system, periplasmic component | MSI_05080 | Not Available | Negative | 628681 - 629850 | 42030.1 |
| hypothetical protein | MSI_05090 | Not Available | Negative | 630090 - 630851 | 27424.5 |
| hypothetical protein | MSI_05100 | Not Available | Negative | 630875 - 631711 | 30743.2 |
| transcriptional regulator | MSI_05110 | Not Available | Negative | 631794 - 632432 | 24943.2 |
| branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase | MSI_05120 | Not Available | Negative | 632515 - 633372 | 32618.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
