Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase (ggdef) domain-containing protein | MSI_04630 | Not Available | Negative | 575177 - 577132 | 74977.1 |
| hypothetical protein | MSI_04640 | Not Available | Positive | 577263 - 578705 | 51115.1 |
| acyl-coenzyme a synthetase/amp-(fatty) acid ligase | MSI_04650 | Not Available | Positive | 578875 - 580620 | 66431.6 |
| hypothetical protein | MSI_04660 | Not Available | Positive | 580623 - 581303 | 26490.2 |
| beta-glucosidase | MSI_04670 | Not Available | Negative | 581300 - 583009 | 62925.6 |
| hypothetical protein | MSI_04680 | Not Available | Negative | 582996 - 583559 | 21850.9 |
| thioredoxin-disulfide reductase | MSI_04690 | Not Available | Negative | 583569 - 584483 | 32777.5 |
| hypothetical protein (duf2147) | MSI_04700 | Not Available | Positive | 584648 - 585145 | 18280.7 |
| putative efflux protein, mate family | MSI_04710 | Not Available | Negative | 585556 - 586899 | 48326.6 |
| glycosyltransferase | MSI_04720 | Not Available | Positive | 586974 - 588191 | 46575.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
