Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | MSI_04330 | Not Available | Positive | 542742 - 544400 | 61214.5 |
| putative membrane protein | MSI_04340 | Not Available | Positive | 544485 - 545078 | 21841.3 |
| sulfate permease (mfs superfamily) | MSI_04350 | Not Available | Positive | 545222 - 546916 | 59463.2 |
| diguanylate cyclase (ggdef) domain-containing protein | MSI_04360 | Not Available | Negative | 547184 - 548563 | 52423.5 |
| glucose-6-phosphate isomerase | MSI_04370 | Not Available | Negative | 548671 - 550254 | 57363.2 |
| phosphotransferase system protein (ntr-type) | MSI_04380 | Not Available | Positive | 550583 - 551029 | 16580.1 |
| hypothetical protein | MSI_04390 | Not Available | Positive | 551123 - 551614 | 18272.8 |
| soluble lytic murein transglycosylase | MSI_04400 | Not Available | Positive | 551773 - 552552 | 28775.9 |
| at-rich dna-binding protein | MSI_04410 | Not Available | Positive | 552809 - 553429 | 23029.1 |
| phosphoserine aminotransferase | MSI_04420 | Not Available | Positive | 553444 - 554580 | 41564.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
