Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prevent-host-death family protein | MSI_04230 | Not Available | Positive | 532340 - 532603 | 10191.0 |
| addiction module toxin, rele/stbe family | MSI_04240 | Not Available | Positive | 532603 - 532917 | 12322.0 |
| gmp synthase (glutamine-hydrolyzing), n-terminal domain or a subunit | MSI_04250 | Not Available | Positive | 532998 - 534875 | 69992.7 |
| hypothetical protein | MSI_04260 | Not Available | Positive | 535246 - 536988 | 66692.3 |
| abc-type transport system, periplasmic component | MSI_04270 | Not Available | Positive | 537150 - 538091 | 33264.0 |
| abc-type transport system, permease component | MSI_04280 | Not Available | Positive | 538180 - 539178 | 35367.5 |
| abc-type uncharacterized transport system, atpase component | MSI_04290 | Not Available | Positive | 539178 - 539963 | 29089.7 |
| Trna-ala | Not Available | Not Available | Positive | 540032 - 540105 | Not Available |
| hypothetical protein | MSI_04310 | Not Available | Positive | 540187 - 541395 | 45938.3 |
| diguanylate cyclase (ggdef) domain-containing protein | MSI_04320 | Not Available | Positive | 541426 - 542580 | 44388.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
