Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate decarboxylase | MSI_03420 | Not Available | Negative | 429545 - 430813 | 47143.4 |
| eal domain-containing protein | MSI_03430 | Not Available | Positive | 430991 - 433258 | 87863.9 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase, b subunit | MSI_03440 | Not Available | Negative | 433357 - 434901 | 57978.7 |
| esterase | MSI_03450 | Not Available | Negative | 434956 - 435771 | 30326.1 |
| pyruvate formate-lyase 1-activating enzyme | MSI_03460 | Not Available | Negative | 435772 - 436518 | 28640.4 |
| diguanylate cyclase (ggdef) domain-containing protein | MSI_03470 | Not Available | Positive | 436735 - 438372 | 61845.2 |
| hypothetical protein | MSI_03480 | Not Available | Negative | 438632 - 439669 | 36739.6 |
| nifu-like protein involved in fe-s cluster formation | MSI_03490 | Not Available | Negative | 439691 - 440392 | 25223.4 |
| hypothetical protein | MSI_03500 | Not Available | Negative | 440458 - 441327 | 32002.5 |
| hypothetical protein | MSI_03510 | Not Available | Negative | 441331 - 443055 | 66148.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
