Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| na+driven multidrug efflux pump | MSI_00200 | Not Available | - | 15631 - 17454 | 67258.2 |
| prephenate dehydrogenase | MSI_00210 | Not Available | - | 17519 - 18415 | 33138.0 |
| phospho-2-dehydro-3-deoxyheptonate aldolase | MSI_00220 | Not Available | - | 18607 - 19641 | 37078.9 |
| rrna methylase | MSI_00230 | Not Available | - | 19993 - 20733 | 27245.6 |
| stage ii sporulation protein e (spoiie) | MSI_00240 | Not Available | + | 20785 - 22101 | 50403.3 |
| nitrogen regulatory protein pii | MSI_00250 | Not Available | - | 22126 - 22788 | 23188.1 |
| protein of unknown function (duf1538) | MSI_00260 | Not Available | - | 22781 - 24346 | 54529.7 |
| 5''-methylthioadenosine/s-adenosylhomocysteine nucleosidase | MSI_00270 | Not Available | - | 24355 - 25056 | 24834.1 |
| hypothetical protein | MSI_00280 | Not Available | - | 25066 - 25443 | 14819.6 |
| lipoprotein signal peptidase | MSI_00290 | Not Available | - | 25444 - 25968 | 19633.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
