Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_27300 | Not Available | Negative | 3003700 - 3004593 | 32757.8 |
| hypothetical protein | MSI_27320 | Not Available | Negative | 3004872 - 3005408 | 19394.7 |
| hypothetical protein | MSI_27330 | Not Available | Negative | 3005420 - 3005881 | 17590.3 |
| site-specific recombinase xerd | MSI_27350 | Not Available | Positive | 3007185 - 3008114 | 36043.7 |
| hypothetical protein | MSI_27410 | Not Available | Negative | 3011471 - 3012022 | 22461.1 |
| abc-type transport system, involved in lipoprotein release, permease component | MSI_27430 | Not Available | Negative | 3012184 - 3012891 | 25938.1 |
| hypothetical protein | MSI_27470 | Not Available | Negative | 3014025 - 3014576 | 22469.9 |
| hypothetical protein | MSI_27500 | Not Available | Positive | 3015822 - 3016244 | 16829.9 |
| glycosyltransferase involved in cell wall biogenesis | MSI_27510 | Not Available | Negative | 3016378 - 3016530 | 5592.6 |
| lps biosynthesis protein | MSI_27520 | Not Available | Negative | 3016527 - 3016889 | 14439.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
