Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_26290 | Not Available | Positive | 2925735 - 2926841 | 43341.6 |
| hypothetical protein | MSI_26300 | Not Available | Negative | 2926855 - 2927367 | 19512.2 |
| 3-dehydroquinate synthetase | MSI_26330 | Not Available | Negative | 2928133 - 2929251 | 40737.1 |
| ribonuclease hii | MSI_26340 | Not Available | Negative | 2929273 - 2929872 | 22419.2 |
| hypothetical protein | MSI_26350 | Not Available | Negative | 2929862 - 2931970 | 77723.5 |
| udp-glucose pyrophosphorylase | MSI_26380 | Not Available | Negative | 2933234 - 2933923 | 25621.1 |
| dna replication protein | MSI_26390 | Not Available | Negative | 2934344 - 2935030 | 26172.4 |
| transposase | MSI_26400 | Not Available | Negative | 2935163 - 2936458 | 49914.9 |
| hypothetical protein | MSI_26420 | Not Available | Negative | 2936755 - 2937684 | 36194.4 |
| abc-type antimicrobial peptide transport system, atpase component | MSI_26430 | Not Available | Positive | 2937771 - 2938502 | 26872.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
