Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar biosynthesis pathway, component flha | MSI_26050 | Not Available | Negative | 2906846 - 2908189 | 50412.4 |
| serine phosphatase rsbu, regulator of sigma subunit | MSI_26070 | Not Available | Positive | 2909337 - 2911352 | 75375.8 |
| hypothetical protein | MSI_26080 | Not Available | Positive | 2911499 - 2911915 | 15776.8 |
| dna-binding regulatory protein, yebc/pmpr family | MSI_26090 | Not Available | Positive | 2911996 - 2912739 | 26676.2 |
| crossover junction endodeoxyribonuclease ruvc | MSI_26100 | Not Available | Positive | 2912790 - 2913335 | 19795.9 |
| hypothetical protein | MSI_26130 | Not Available | Positive | 2914187 - 2914570 | 13714.8 |
| Trna-leu | Not Available | Not Available | Positive | 2914592 - 2914672 | Not Available |
| hypothetical protein | MSI_26150 | Not Available | Positive | 2914873 - 2915625 | 27810.2 |
| dehydrogenase | MSI_26160 | Not Available | Positive | 2915622 - 2916296 | 24732.7 |
| flavoprotein | MSI_26170 | Not Available | Negative | 2916316 - 2917482 | 43400.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
