Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_25800 | Not Available | Negative | 2885254 - 2885724 | 18292.0 |
| putative nadh:ubiquinone oxidoreductase, subunit rnfd | MSI_25810 | Not Available | Negative | 2885721 - 2886725 | 37169.6 |
| hypothetical protein | MSI_25840 | Not Available | Negative | 2888945 - 2889508 | 20623.8 |
| hypothetical protein | MSI_25850 | Not Available | Negative | 2889508 - 2890221 | 26720.4 |
| dimethyladenosine transferase | MSI_25860 | Not Available | Negative | 2890218 - 2891090 | 32648.1 |
| putative membrane metal-binding protein | MSI_25870 | Not Available | Negative | 2891093 - 2892382 | 47170.7 |
| hypothetical protein | MSI_25880 | Not Available | Negative | 2892373 - 2892819 | 16615.9 |
| hypothetical protein | MSI_25890 | Not Available | Negative | 2892961 - 2893251 | 11056.2 |
| site-specific recombinase xerd | MSI_25910 | Not Available | Negative | 2893945 - 2895159 | 47356.6 |
| Trna-lys | Not Available | Not Available | Positive | 2895301 - 2895373 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
