Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function (duf2804) | MSI_02400 | Not Available | Negative | 297962 - 299017 | 39711.2 |
| hypothetical protein | MSI_02410 | Not Available | Positive | 299206 - 299667 | 17558.0 |
| methyl-accepting chemotaxis protein | MSI_02420 | Not Available | Negative | 299738 - 301828 | 75359.0 |
| ribosomal protein s16 | MSI_02430 | Not Available | Positive | 302001 - 302246 | 9172.17 |
| putative rna-binding protein | MSI_02440 | Not Available | Positive | 302265 - 302498 | 8386.18 |
| 16s rrna processing protein rimm | MSI_02450 | Not Available | Positive | 302514 - 303101 | 21632.8 |
| trna (guanine-n1)-methyltransferase | MSI_02460 | Not Available | Positive | 303106 - 303891 | 29851.1 |
| ribosomal protein l19, bacterial type | MSI_02470 | Not Available | Positive | 303901 - 304365 | 17142.9 |
| inorganic pyrophosphatase/exopolyphosphatase | MSI_02480 | Not Available | Negative | 304433 - 305542 | 40768.8 |
| hypothetical protein | MSI_02490 | Not Available | Positive | 305716 - 306108 | 14304.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
