Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_25460 | Not Available | Negative | 2857619 - 2858500 | 34898.4 |
| putative transcriptional regulator | MSI_25470 | Not Available | Negative | 2858524 - 2859525 | 39152.2 |
| hypothetical protein | MSI_25480 | Not Available | Negative | 2859569 - 2860573 | 39328.2 |
| hypothetical protein | MSI_25490 | Not Available | Negative | 2860573 - 2860752 | 7037.64 |
| helix-turn-helix domain-containing protein | MSI_25510 | Not Available | Positive | 2861406 - 2861684 | 10490.7 |
| atpase | MSI_25520 | Not Available | Negative | 2861713 - 2863482 | 68656.8 |
| Trna-ser | Not Available | Not Available | Positive | 2863584 - 2863670 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 2863674 - 2863750 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 2863761 - 2863834 | Not Available |
| Trna-trp | Not Available | Not Available | Positive | 2863838 - 2863910 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
