Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_25010 | Not Available | Negative | 2808845 - 2809618 | 28653.3 |
| putative rna-binding protein | MSI_25020 | Not Available | Negative | 2809688 - 2810389 | 26941.0 |
| membrane protein insertase, yidc/oxa1 family | MSI_25030 | Not Available | Negative | 2810429 - 2812195 | 67181.3 |
| ribosomal protein l34 | MSI_25040 | Not Available | Negative | 2812811 - 2812966 | 6006.47 |
| hypothetical protein | MSI_25050 | Not Available | Negative | 2813047 - 2813601 | 20945.1 |
| recf protein | MSI_25060 | Not Available | Negative | 2813594 - 2814694 | 42997.5 |
| dna polymerase iii, beta subunit | MSI_25070 | Not Available | Negative | 2814694 - 2815818 | 41748.3 |
| dna gyrase, a subunit | MSI_25090 | Not Available | Negative | 2818023 - 2820536 | 93162.2 |
| dna gyrase, b subunit | MSI_25100 | Not Available | Negative | 2820555 - 2822474 | 71895.0 |
| chromosomal replication initiator protein dnaa | MSI_25110 | Not Available | Positive | 2822650 - 2824098 | 55287.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
