Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_24340 | Not Available | Positive | 2742475 - 2743398 | 35476.6 |
| hypothetical protein | MSI_24350 | Not Available | Positive | 2743471 - 2743668 | 7072.49 |
| putative membrane protein involved in d-alanine export | MSI_24360 | Not Available | Positive | 2743979 - 2745232 | 48371.9 |
| phosphopantetheine attachment site | MSI_24370 | Not Available | Negative | 2745243 - 2745464 | 8234.78 |
| diaminopimelate decarboxylase | MSI_24380 | Not Available | Negative | 2745491 - 2746657 | 43933.0 |
| acyl-coa synthetase (amp-forming) | MSI_24390 | Not Available | Negative | 2746641 - 2746982 | 13018.8 |
| non-ribosomal peptide synthetase module | MSI_24400 | Not Available | Negative | 2747021 - 2747761 | 27675.4 |
| methyl-accepting chemotaxis protein | MSI_24410 | Not Available | Positive | 2747953 - 2750010 | 72812.7 |
| holliday junction dna helicase, ruvb subunit | MSI_24420 | Not Available | Positive | 2750116 - 2751177 | 39090.1 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | MSI_24430 | Not Available | Positive | 2751266 - 2752339 | 40488.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
