Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_24220 | Not Available | Negative | 2727341 - 2727721 | 14816.4 |
| hypothetical protein | MSI_24230 | Not Available | Negative | 2727742 - 2728770 | 39913.3 |
| hypothetical protein | MSI_24240 | Not Available | Negative | 2728790 - 2729143 | 13928.4 |
| leucyl/phenylalanyl-trna--protein transferase | MSI_24250 | Not Available | Positive | 2729202 - 2730764 | 60379.5 |
| flagellar motor switch protein | MSI_24260 | Not Available | Positive | 2730808 - 2731533 | 28341.7 |
| flagellar biosynthesis pathway, component flha | MSI_24270 | Not Available | Negative | 2731536 - 2732300 | 28477.7 |
| atp-dependent exodnase (exonuclease v) beta subunit | MSI_24280 | Not Available | Negative | 2732379 - 2735498 | 117860.0 |
| type i phosphodiesterase / nucleotide pyrophosphatase | MSI_24310 | Not Available | Negative | 2737483 - 2739114 | 62610.4 |
| membrane protein insertase, yidc/oxa1 family | MSI_24320 | Not Available | Negative | 2739167 - 2740315 | 43602.4 |
| histidinol-phosphate/aromatic aminotransferase | MSI_24330 | Not Available | Negative | 2740347 - 2742176 | 69284.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
