Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid aminotransferase, group ii | MSI_23660 | Not Available | Negative | 2676179 - 2677201 | 37649.1 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | MSI_23670 | Not Available | Negative | 2677288 - 2678052 | 29297.3 |
| putative rad3 dna helicase family protein | MSI_23680 | Not Available | Negative | 2678101 - 2680563 | 92386.5 |
| Trna-glu | Not Available | Not Available | Positive | 2680684 - 2680755 | Not Available |
| ribosomal protein s20 | MSI_23700 | Not Available | Positive | 2680938 - 2681216 | 10607.0 |
| bacterial nucleoid dna-binding protein | MSI_23710 | Not Available | Positive | 2681304 - 2681627 | 12251.9 |
| integral membrane protein ccma involved in cell shape determination | MSI_23720 | Not Available | Positive | 2681648 - 2682070 | 15180.0 |
| transcription termination factor rho | MSI_23730 | Not Available | Positive | 2682232 - 2684016 | 65799.9 |
| ribosomal protein l31 | MSI_23740 | Not Available | Positive | 2684395 - 2684604 | 7875.61 |
| putative sam-dependent methyltransferase | MSI_23750 | Not Available | Negative | 2684753 - 2685865 | 43216.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
