Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe2+ transport system protein a | MSI_23560 | Not Available | Negative | 2666539 - 2666760 | 8135.16 |
| fe2+ transport system protein a | MSI_23570 | Not Available | Negative | 2666781 - 2666993 | 7686.58 |
| hypothetical protein | MSI_23580 | Not Available | Negative | 2667198 - 2667347 | 5700.89 |
| hypothetical protein | MSI_23590 | Not Available | Negative | 2667445 - 2669079 | 60914.4 |
| ppic-type ppiase domain-containing protein | MSI_23600 | Not Available | Negative | 2669089 - 2670555 | 54636.6 |
| d-alanine--d-alanine ligase | MSI_23610 | Not Available | Negative | 2670601 - 2671734 | 41601.9 |
| udp-n-acetylmuramyl-tripeptide synthetase | MSI_23620 | Not Available | Negative | 2671755 - 2673461 | 62316.9 |
| queuosine biosynthesis protein qued | MSI_23630 | Not Available | Positive | 2673540 - 2673944 | 15183.8 |
| Trna-asn | Not Available | Not Available | Positive | 2674686 - 2674751 | Not Available |
| hypothetical protein | MSI_23650 | Not Available | Positive | 2674858 - 2676105 | 45866.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
